Stem-loop isc-mir-iab-4

Accession

MI0016445

Description

Ixodes scapularis isc-mir-iab-4 precursor miRNA

Sequence

gauucgcggcgccucccguUCGUAUACUGAGUGUAUCCUGAguguuuaauuuuccgguauaccuucaguauacguaacgggggacccggagaaugcgcgga
.((((.(((.(.(((((((((((((((((((.((((((.(((.........))).)).)))).))))))))))).)))))))).))))..)))).......

Structure

------g    -g   c c        -           U    -  U   ugu 
       auuc  cgg g cucccguU CGUAUACUGAG GUAU CC GAg   u
       ||||  ||| | |||||||| ||||||||||| |||| || |||   u
       uaag  gcc c gggggcaa gcauaugacuu caua gg cuu   a
aggcgcg    ag   - a        u           c    u  c   uua 

Annotation confidence Not enough data

Genome context

Unknown

Mature isc-miR-iab-4

• Accession: MIMAT0018921
• Description: Ixodes scapularis isc-miR-iab-4 mature miRNA
• Sequence: 20 - UCGUAUACUGAGUGUAUCCUGA - 41
• Evidence: not_experimental

References

1. PubMed ID: 20702459
   A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata
   "Rota-Stabelli O, Campbell L, Brinkmann H, Edgecombe GD, Longhorn SJ, Peterson KJ, Pisani D, Philippe H, Telford MJ"
   "Proc Biol Sci (2011) 278:298-306