Stem-loop dpu-mir-279b

Accession

MI0016447

Description

Daphnia pulex dpu-mir-279b precursor miRNA

Literature search

1 open access papers mention dpu-mir-279b
(2 sentences)

Sequence

aucuugagcauacgucagucggcgaguucgguuuuaguuguauuuuaaauuuagucgguaUGACUAGAACCCACACUCGUCCGGuugcuguauucuauuuc
......((.(((((.((((((((((((..(((((((((((((((............)))))))))))))))...))))).))))))).))))).)).....

Structure

aucuug  c     u       -     -uc               uuaaa 
      ag auacg cagucgg cgagu   gguuuuaguuguauu     u
      || ||||| ||||||| |||||   |||||||||||||||      
      uc uaugu guuGGCC GCUCA   CCAAGAUCAGUaugg     u
-cuuua  u     c       U     CAC               cugau 

Annotation confidence Low

Genome context

GL732554.1: 68646-68746 [-]

Mature dpu-miR-279b

• Accession: MIMAT0018923
• Description: Daphnia pulex dpu-miR-279b mature miRNA
• Sequence: 61 - UGACUAGAACCCACACUCGUCCGG - 84
• Evidence: not_experimental

References

1. PubMed ID: 20702459
   A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata
   "Rota-Stabelli O, Campbell L, Brinkmann H, Edgecombe GD, Longhorn SJ, Peterson KJ, Pisani D, Philippe H, Telford MJ"
   "Proc Biol Sci (2011) 278:298-306