Stem-loop tae-MIR395b

Accession

MI0016464

Description

Triticum aestivum tae-MIR395b precursor miRNA

Literature search

12 open access papers mention tae-MIR395b
(28 sentences)

Sequence

48623 reads, 734.0 reads per million, 218 experiments

cUGAAGUGUUUGGGGGAACUCuuggugucaccaagcauuuaguagacauuggccacauaucauaagagagaugcaucaaugggcugaauguuuggucuuaccauggGUUCCUUGCAAGCACUUC
..(((((((((((((((((((.(((((..((((((((((((((...((((((...(((.((......)).)))..)))))).))))))))))))))..))))).))))))))).))))))))))

Structure

cU          -         u     uc              aga      cca   a  au 
  GAAGUGUUUG GGGGAACUC uggug  accaagcauuuagu   cauugg   cau uc  a
  |||||||||| ||||||||| |||||  ||||||||||||||   ||||||   ||| ||   
  CUUCACGAAC UUCCUUGgg accau  ugguuuguaagucg   guaacu   gua ag  a
--          G         u     uc              --g      -ac   g  ag 

Annotation confidence Medium

Genome context

Unknown

Mature tae-miR395b-5p

• Accession: MIMAT0018223
• Description: Triticum aestivum tae-miR395b-5p mature miRNA
• Sequence: 2 - UGAAGUGUUUGGGGGAACUC - 21
• Evidence: not_experimental

Mature tae-miR395b-3p

• Accession: MIMAT0056501
• Description: Triticum aestivum tae-miR395b-3p mature miRNA
• Sequence: 107 - GUUCCUUGCAAGCACUUC - 124
• Evidence: experimental ; unknown

References

1. PubMed ID: 18521122
   Data mining for miRNAs and their targets in the Triticeae
   "Dryanova A, Zakharov A, Gulick PJ"
   "Genome (2008) 51:433-443