Stem-loop tae-MIR444b

Accession

MI0016467

Description

Triticum aestivum tae-MIR444b precursor miRNA

Literature search

13 open access papers mention tae-MIR444b
(34 sentences)

Sequence

13681 reads, 91 reads per million, 116 experiments

gauaugcauguggcggcaccgagcaugaggcaacaacugcauuacuugcggggaaggcgcaaguaggacaccugcauuacuugcaaacaaggcgcaccauacuuguggcuuucuugcaagucgugcagUUGCUGCCUCAAGCUUGCUGCcuccacauguaua
..(((((((((((.((((.(((((.(((((((.(((((((((.(((((((((((((.((((((((((.(.((((((.....))).....))).)..)).)))))))).))))))))))))).))))))))).))))))).))))).)))).)))))))))))

Structure

ga           c    c     a       a         u             g        -  -a a   -----   u 
  uaugcaugugg ggca cgagc ugaggca caacugcau acuugcggggaag cgcaagua gg  c ccu     gca u
  ||||||||||| |||| ||||| ||||||| ||||||||| ||||||||||||| |||||||| ||  | |||     ||| a
  auauguacacc cCGU GUUCG ACUCCGU GUUgacgug ugaacguucuuuc guguucau cc  g gga     cgu c
--           u    C     A       C         c             g        a  ac c   acaaa   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature tae-miR444b

• Accession: MIMAT0018226
• Description: Triticum aestivum tae-miR444b mature miRNA
• Sequence: 129 - UUGCUGCCUCAAGCUUGCUGC - 149
• Evidence: not_experimental

References

1. PubMed ID: 18521122
   Data mining for miRNAs and their targets in the Triticeae
   "Dryanova A, Zakharov A, Gulick PJ"
   "Genome (2008) 51:433-443