Stem-loop gma-MIR4341

Accession

MI0016470

Description

Glycine max gma-MIR4341 precursor miRNA

Literature search

1 open access papers mention gma-MIR4341
(1 sentences)

Sequence

1700 reads, 7.0 reads per million, 151 experiments

acccuCAUGUGAAACUUUCAACAuauuucucuauuuagguguaaccacaccuucccucacacucaauagauucuuauauagauaaagagaUGUGUUGAAAGUUUAACAUGACGGgu
((((((((((.(((((((((((((((((((.(((((((((((....))))))...........................))))).))))))))))))))))))).)))))).))))

Structure

    -      G                   c     ---------------------------      a 
accc uCAUGU AAACUUUCAACAuauuucu uauuu                           aggugu a
|||| |||||| ||||||||||||||||||| |||||                           ||||||  
ugGG AGUACA UUUGAAAGUUGUGUagaga auaga                           uccaca c
    C      A                   a     uauauucuuagauaacucacacucccu      c 

Annotation confidence Low

Genome context

chr6: 12004246-12004361 [-]

Mature gma-miR4341-5p

• Accession: MIMAT0054064
• Description: Glycine max gma-miR4341-5p mature miRNA
• Sequence: 6 - CAUGUGAAACUUUCAACA - 23
• Evidence: experimental ; unknown

Mature gma-miR4341-3p

• Accession: MIMAT0018229
• Description: Glycine max gma-miR4341-3p mature miRNA
• Sequence: 91 - UGUGUUGAAAGUUUAACAUGACGG - 114
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14