Stem-loop gma-MIR4342

Accession

MI0016471

Description

Glycine max gma-MIR4342 precursor miRNA

Sequence

1898 reads, 14.0 reads per million, 171 experiments

ucuuuucaccacuuacauucUAAGACGAGUUUGUUGAAUCGACUUAGAAUGUAGGAUGGUggcauuu
.....(((((((((((((((((((.(((..........))).))))))))))))).)))))).....

Structure

ucuuu      -             A   GUUU 
     ucacca cuuacauucUAAG CGA    G
     |||||| ||||||||||||| |||     
     ggUGGU GGAUGUAAGAUUC GCU    U
uuuac      A             A   AAGU 

Annotation confidence Medium

Genome context

chr18: 14013079-14013145 [+]

Mature gma-miR4342-5p

• Accession: MIMAT0054065
• Description: Glycine max gma-miR4342-5p mature miRNA
• Sequence: 21 - UAAGACGAGUUUGUUGAAUCGAC - 43
• Evidence: experimental ; unknown

Mature gma-miR4342-3p

• Accession: MIMAT0018230
• Description: Glycine max gma-miR4342-3p mature miRNA
• Sequence: 37 - AAUCGACUUAGAAUGUAGGAUGGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14