Stem-loop gma-MIR4352a

Accession

MI0016482

Description

Glycine max gma-MIR4352a precursor miRNA

Sequence

9612 reads, 24.0 reads per million, 165 experiments

agaaccgucguaguauAUCUUAAAAACUAAGGCGGUCGUaugaauagccaucauagaauuucaacagcaaaaaugcuauucuaagacgguuauucgaauaaccgucuuaAUUUCUAGGACAUACUACGACGGUucu
((((((((((((((((.(((((.(((.(((((((((.((.(((((((((.((.((((((......((((....)))))))))).)).))))))))).)).))))))))).))).))))).))))))))))))))))

Structure

                A     A   C         C  a         a  a      uucaac    a 
agaaccgucguaguau UCUUA AAA UAAGGCGGU GU ugaauagcc uc uagaau      agca a
|||||||||||||||| ||||| ||| ||||||||| || ||||||||| || ||||||      ||||  
ucuUGGCAGCAUCAUA AGGAU UUU auucugcca ua gcuuauugg ag aucuua      ucgu a
                C     C   A         a  a         c  a      ------    a 

Annotation confidence Low

Genome context

chr10: 24453395-24453530 [+]

Mature gma-miR4352a-5p

• Accession: MIMAT0054074
• Description: Glycine max gma-miR4352a-5p mature miRNA
• Sequence: 17 - AUCUUAAAAACUAAGGCGGUCGU - 39
• Evidence: experimental ; unknown

Mature gma-miR4352a-3p

• Accession: MIMAT0018241
• Description: Glycine max gma-miR4352a-3p mature miRNA
• Sequence: 110 - AUUUCUAGGACAUACUACGACGGU - 133
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14