Stem-loop gma-MIR4371a

Accession

MI0016514

Description

Glycine max gma-MIR4371a precursor miRNA

Sequence

4862 reads, 19.0 reads per million, 172 experiments

guuAAGUGAUGACAUGACAAGCGAAGUaucacguuaucacccucuugucauauuaucaccuuuaaugacauacgugucaaugaUUGAACGUGAUGAUGUGAUAUUCUguuugucauguuaucaccuaa
.....((((((((((((((((((.((((((((((((((((..((..(((((..............(((((....)))))))))).))..)))))))))))))))).))))))))))))))))))....

Structure

guuAA                  A                cc  uu     auuaucaccuuuaa     u 
     GUGAUGACAUGACAAGCG AGUaucacguuaucac  uc  gucau              ugaca a
     |||||||||||||||||| ||||||||||||||||  ||  |||||              |||||  
     cacuauuguacuguuugU UUAUAGUGUAGUAGUG  AG  Uagua              acugu c
-aauc                  C                CA  -U     --------------     g 

Annotation confidence Low

Genome context

chr17: 4626871-4626998 [+]

Mature gma-miR4371a-5p

• Accession: MIMAT0018273
• Description: Glycine max gma-miR4371a-5p mature miRNA
• Sequence: 4 - AAGUGAUGACAUGACAAGCGAAGU - 27
• Evidence: experimental ; Illumina [1]

Mature gma-miR4371a-3p

• Accession: MIMAT0054105
• Description: Glycine max gma-miR4371a-3p mature miRNA
• Sequence: 84 - UUGAACGUGAUGAUGUGAUAUUCU - 107
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14