Stem-loop gma-MIR4371b

Accession

MI0016515

Description

Glycine max gma-MIR4371b precursor miRNA

Sequence

15452 reads, 46.0 reads per million, 172 experiments

uuguuaguugccuuucguuAAGUGAUGACGUGGUAGACGGAGUgccgugucauuaugccuugucacagacaccucauugcuacaucaucaccgcuaaugauauggcacugacguguuagugauuggugugAUGACGUGACACUCUAUCugccacaucaucaccuaacggaagacaacuaacga
((((((((((.(((((((((.(((((((.((((((((.((((((.((((((((((((((..(((((.(((((.(((.(((((.(((((........))))).))))).))).))))).))))).)))))))))))))).)))))).)))))))).))))))).))))))))).))))))))))

Structure

          c         A       C        C      c              uu     a     c   u     c     cac 
uuguuaguug cuuucguuA GUGAUGA GUGGUAGA GGAGUg cgugucauuaugcc  gucac gacac uca ugcua aucau   c
|||||||||| ||||||||| ||||||| |||||||| |||||| ||||||||||||||  ||||| ||||| ||| ||||| |||||    
agcaaucaac gaaggcaau cacuacu caccguCU UCUCAC GUGCAGUAgugugg  uagug uugug agu acggu uagua   g
          a         c       a        A      A              -u     a     c   c     a     auc 

Annotation confidence Low

Genome context

chr7: 24370816-24370998 [-]

Mature gma-miR4371b-5p

• Accession: MIMAT0018274
• Description: Glycine max gma-miR4371b-5p mature miRNA
• Sequence: 20 - AAGUGAUGACGUGGUAGACGGAGU - 43
• Evidence: experimental ; Illumina [1]

Mature gma-miR4371b-3p

• Accession: MIMAT0054106
• Description: Glycine max gma-miR4371b-3p mature miRNA
• Sequence: 131 - AUGACGUGACACUCUAUC - 148
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14