Stem-loop gma-MIR4372a

Accession

MI0016516

Description

Glycine max gma-MIR4372a precursor miRNA

Sequence

3189 reads, 11.0 reads per million, 166 experiments

acguugaucaucauaugucauaAUUUUACUGGACGUUAAUUUCAUGuauuuaauuaacgucaaucuauacaccuaauuaacgucaaccuccaaUAAAAUCGUGACAUGUGACGGUCAaugu
(((((((((.(((((((((((.((((((.((((((((((((...(((((.................)))))...))))))))......)))).)))))).))))))))))).)))))))))

Structure

         a           a      C    ------        UCA     uuaauua 
acguugauc ucauaugucau AUUUUA UGGA      CGUUAAUU   UGuau       a
||||||||| ||||||||||| |||||| ||||      ||||||||   |||||       c
uguaACUGG AGUGUACAGUG UAAAAU accu      gcaauuaa   acaua       g
         C           C      a    ccaacu        ucc     ucuaacu 

Annotation confidence Low

Genome context

chr10: 49480492-49480612 [-]

Mature gma-miR4372a-5p

• Accession: MIMAT0054107
• Description: Glycine max gma-miR4372a-5p mature miRNA
• Sequence: 23 - AUUUUACUGGACGUUAAUUUCAUG - 46
• Evidence: experimental ; unknown

Mature gma-miR4372a-3p

• Accession: MIMAT0018275
• Description: Glycine max gma-miR4372a-3p mature miRNA
• Sequence: 94 - UAAAAUCGUGACAUGUGACGGUCA - 117
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14