Dead hairpin entry

Stem-loop gma-MIR4378a

Accession

MI0016524

Description

Glycine max gma-MIR4378a precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention gma-MIR4378a
(1 sentences)

Sequence

5665 reads, 17.0 reads per million, 175 experiments

ucAUAGGACUGUCUUAGAAUGGUGUAcauucuaaaacagucuccaacacaaacucgucuuagaaugucauacauuuuaagacgggcuuaugucauacacucuaagauggauuuauccuggggauugucuuagaauguacaacAUUAUAAGACGGUCUGCGUGA
((((.(((((((((((.((((.((((((((((((.(((((((((((((.((.(((((((((((((((...))))))))))))))).)).)))...............(((....))))))))))))).)))))))))))).)))).)))))))))))..))))

Structure

    -A           G    G            a          -------------------------   c  a               c 
ucAU  GGACUGUCUUA AAUG UGUAcauucuaa acagucucca                         aca aa cucgucuuagaaugu  
||||  ||||||||||| |||| |||||||||||| ||||||||||                         ||| || ||||||||||||||| a
AGUG  UCUGGCAGAAU UUAc acauguaagauu uguuaggggu                         ugu uu gggcagaauuuuaca  
    CG           A    a            c          ccuauuuagguagaaucucacauac   a  c               u