Stem-loop gma-MIR4378b

Accession

MI0016525

Description

Glycine max gma-MIR4378b precursor miRNA

Sequence

18738 reads, 52.0 reads per million, 166 experiments

uUAGAACUGUCUUAGAAUGUGCUACauuccaagaugauggucuucuuucgaaaaucaccuuagaaugcgacACAUUCUAAGACGGUUCUaa
.((((((((((((((((((((...(((((.(((.((((..((.......))..)))).))).)))))...)))))))))))))))))))).

Structure

u                    CUA     c   a    gg  uu 
 UAGAACUGUCUUAGAAUGUG   Cauuc aag ugau  uc  c
 ||||||||||||||||||||   ||||| ||| ||||  ||  u
 aUCUUGGCAGAAUCUUACAc   guaag uuc acua  ag  u
a                    agc     a   c    aa  cu 

Annotation confidence Low

Genome context

chr9: 31722886-31722976 [-]

Mature gma-miR4378b-5p

• Accession: MIMAT0018284
• Description: Glycine max gma-miR4378b-5p mature miRNA
• Sequence: 2 - UAGAACUGUCUUAGAAUGUGCUAC - 25
• Evidence: experimental ; Illumina [1]

Mature gma-miR4378b-3p

• Accession: MIMAT0054114
• Description: Glycine max gma-miR4378b-3p mature miRNA
• Sequence: 72 - ACAUUCUAAGACGGUUCU - 89
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14