Stem-loop gma-MIR4379

Accession

MI0016526

Description

Glycine max gma-MIR4379 precursor miRNA

Sequence

8319 reads, 35.0 reads per million, 178 experiments

uUAGAGUGUAUACUGUGAGAGGCCUaacucaaccccaaaagcuaacucAAGGGAUGAGGGUUGCCCCUUauuuauauauucuaa
.(((((((((((..(((((.(((....((((.(((....((....))...))).))))....))).))))).))))))))))).

Structure

u           CU     A   CUaa    a   caaa  c 
 UAGAGUGUAUA  GUGAG GGC    cuca ccc    ag u
 |||||||||||  ||||| |||    |||| |||    ||  
 aucuuauauau  uaUUC CCG    GAGU GGG    uc a
a           -u     C   UUGG    A   -AAc  a 

Annotation confidence Medium

Genome context

chr7: 1503356-1503439 [-]

Mature gma-miR4379-5p

• Accession: MIMAT0018285
• Description: Glycine max gma-miR4379-5p mature miRNA
• Sequence: 2 - UAGAGUGUAUACUGUGAGAGGCCU - 25
• Evidence: experimental ; Illumina [1]

Mature gma-miR4379-3p

• Accession: MIMAT0054115
• Description: Glycine max gma-miR4379-3p mature miRNA
• Sequence: 49 - AAGGGAUGAGGGUUGCCCCUU - 69
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14