Stem-loop gma-MIR4381

Accession

MI0016529

Description

Glycine max gma-MIR4381 precursor miRNA

Sequence

cuugucaacguugacagucacaugucgcacuuuuauugaacauuauaugucacgauuuuauuagagguugacauuaauuaaguguacaaaaucaacguccaauaaaugcacgaUAUGUGACGGUAAACGGUGACAAGu
(((((((.((((.((.(((((((((((..(.(((((((.((((...)))).............((.(((((((((.....)))).......))))).))))))))).)..))))))))))).)).)))).))))))).

Structure

-       a    g  a           ca u       aacauuauaugucacgauuuuauua  g     -------    a 
 cuuguca cguu ac gucacaugucg  c uuuauug                         ga guuga       cauu a
 ||||||| |||| || |||||||||||  | |||||||                         || |||||       |||| u
 GAACAGU GCAA UG CAGUGUAUagc  g aaauaac                         cu caacu       guga u
u       G    A  G           ac u       -------------------------  g     aaaacau    a 

Annotation confidence Not enough data

Genome context

chr15: 47293543-47293680 [-]

Mature gma-miR4381

• Accession: MIMAT0018288
• Description: Glycine max gma-miR4381 mature miRNA
• Sequence: 114 - UAUGUGACGGUAAACGGUGACAAG - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14