Stem-loop gma-MIR4383

Accession

MI0016531

Description

Glycine max gma-MIR4383 precursor miRNA

Sequence

10707 reads, 29.0 reads per million, 165 experiments

ggaccgguucaacugagauccgguaccuaaccgaucgauuuuaaucgaaucaUCUCAGAUCAAUUGUGUGACCgaucuaauauaaaacugauccaauuagguUAUUGGAUCUCAGUUGAACCGGUCu
((((((((((((((((((((((((((((((..(((((.(((((((((..((((..(((.....))).)))).))))......))))).)))))...))))).)))))))))))))))))))))))))

Structure

                         -     -cc     a     ------    aa    CU   A 
ggaccgguucaacugagauccggua ccuaa   gaucg uuuua      aucg  ucaU  CAG U
||||||||||||||||||||||||| |||||   ||||| |||||      ||||  ||||  ||| C
uCUGGCCAAGUUGACUCUAGGUUAU ggauu   cuagu aaaau      uagC  AGUG  GUU A
                         u     aac     c     auaauc    -C    -U   A 

Annotation confidence Low

Genome context

chr2: 26866450-26866576 [+]

Mature gma-miR4383-5p

• Accession: MIMAT0054119
• Description: Glycine max gma-miR4383-5p mature miRNA
• Sequence: 53 - UCUCAGAUCAAUUGUGUGACC - 73
• Evidence: experimental ; unknown

Mature gma-miR4383-3p

• Accession: MIMAT0018290
• Description: Glycine max gma-miR4383-3p mature miRNA
• Sequence: 103 - UAUUGGAUCUCAGUUGAACCGGUC - 126
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14