Stem-loop gma-MIR4388

Accession

MI0016541

Description

Glycine max gma-MIR4388 precursor miRNA

Literature search

1 open access papers mention gma-MIR4388
(2 sentences)

Sequence

gacacugucaauuuggucuuuaagauuuaaaaaaugucaaaaugauccucgacuuuacauuccguuugucacgguguuaggagacuacuaacggcagggacuaacgugccaaggaucauuuugauauuuuuuaAAUCUUAGGGACCAAAUUGACAGCgcc
..(.(((((((((((((((((((((((((((((((((((((((((((((............((((.....)))).(((((.......)))))((((.(......).)))).))))))))))))))))))))))))))))))))))))))))))))).)..

Structure

ga a                                             cgacuuuacauuccguuugucacggu     ga 
  c cugucaauuuggucuuuaagauuuaaaaaaugucaaaaugauccu                          guuag  g
  | |||||||||||||||||||||||||||||||||||||||||||||                          |||||  a
  g GACAGUUAAACCAGGGAUUCUAAauuuuuuauaguuuuacuagga                          caauc  c
cc C                                             -------accgugcaaucagggacgg     au 

Annotation confidence Not enough data

Genome context

chr10: 46504519-46504678 [-]

Mature gma-miR4388

• Accession: MIMAT0018300
• Description: Glycine max gma-miR4388 mature miRNA
• Sequence: 134 - AAUCUUAGGGACCAAAUUGACAGC - 157
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14