Stem-loop gma-MIR4387d

Accession

MI0016542

Description

Glycine max gma-MIR4387d precursor miRNA

Literature search

1 open access papers mention gma-MIR4387d
(1 sentences)

Sequence

2626 reads, 11.0 reads per million, 167 experiments

gagugucacguuaucaugucuugucauugaCAUCUCAUUGUCAUGUCAUCAccuucaauaacgugacauugauAUGUCACUGAUUAGGCAUGAUGAUgugacacuc
(((((((((((((((((((((.((((.((((((.(((.((((((((.((........)).)))))))).))).)))))).)))).)))))))))))))))))))))

Structure

                     u    u      C   U        C  CAc 
gagugucacguuaucaugucu guca ugaCAU UCA UGUCAUGU AU   c
||||||||||||||||||||| |||| |||||| ||| |||||||| ||    
cucacagugUAGUAGUACGGA UAGU ACUGUA agu acagugca ua   u
                     U    C      u   u        a  acu 

Annotation confidence Low

Genome context

chr18: 43759747-43759852 [-]

Mature gma-miR4387d-5p

• Accession: MIMAT0054130
• Description: Glycine max gma-miR4387d-5p mature miRNA
• Sequence: 31 - CAUCUCAUUGUCAUGUCAUCA - 51
• Evidence: experimental ; unknown

Mature gma-miR4387d-3p

• Accession: MIMAT0018301
• Description: Glycine max gma-miR4387d-3p mature miRNA
• Sequence: 74 - AUGUCACUGAUUAGGCAUGAUGAU - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14