Stem-loop gma-MIR4389

Accession

MI0016543

Description

Glycine max gma-MIR4389 precursor miRNA

Literature search

1 open access papers mention gma-MIR4389
(1 sentences)

Sequence

cggUCGGUCGGACCGAUCCAAUCGGAAucuaguggccuaaccagaucgguuuuacuauuggauugaucaugcaauuaaccuugaaugaccugaucaaacucggccgauuauguaucgaauuccaguuggaccgguccgacucggccg
(((((((((((((((.((((((.((((((((((((...((((.....))))...))))))).(((((((.(((.(((....))).)).).))))))).......((((.....)))).))))).)))))).))))))))).))))))

Structure

      -         A      C     cuaguggccuaaccagaucgguuuuacuauugga       u -  a   a 
cggUCG GUCGGACCG UCCAAU GGAAu                                  uugauca g ca uua c
|||||| ||||||||| |||||| |||||                                  ||||||| | || |||  
gccggc cagccuggc agguug ccuua                                  aacuagu c gu agu c
      u         c      a     -------------agcuauguauuagccggcuca       c a  a   u 

Annotation confidence Not enough data

Genome context

chr13: 32881750-32881896 [-]

Mature gma-miR4389

• Accession: MIMAT0018302
• Description: Glycine max gma-miR4389 mature miRNA
• Sequence: 4 - UCGGUCGGACCGAUCCAAUCGGAA - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14