Stem-loop gma-MIR4390

Accession

MI0016544

Description

Glycine max gma-MIR4390 precursor miRNA

Sequence

4332 reads, 11.0 reads per million, 161 experiments

cguacccgauacucgauggguuugAGUUUAUUGUCUCAUCCUCGUACUCGUCGGGUAUCGGGUAUc
.((((((((((((((((((((.((((..............)))).)))))))))))))))))))).

Structure

c                    u    UUUAUU 
 guacccgauacucgaugggu ugAG      G
 |||||||||||||||||||| ||||       
 UAUGGGCUAUGGGCUGCUCA GCUC      U
c                    U    CUACUC 

Annotation confidence Low

Genome context

chr17: 15303731-15303796 [+]

Mature gma-miR4390-5p

• Accession: MIMAT0054132
• Description: Glycine max gma-miR4390-5p mature miRNA
• Sequence: 25 - AGUUUAUUGUCUCAUCCUCGUAC - 47
• Evidence: experimental ; unknown

Mature gma-miR4390-3p

• Accession: MIMAT0018303
• Description: Glycine max gma-miR4390-3p mature miRNA
• Sequence: 42 - UCGUACUCGUCGGGUAUCGGGUAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14