Stem-loop gma-MIR4400

Accession

MI0016557

Description

Glycine max gma-MIR4400 precursor miRNA

Sequence

cggaagacucuucuUUCGGAAAAAUUCUGGAAGACGUCacuccgaaaaacuccuagaagaaccuucuuccggaagaagaaggugggccucccgaagaacuccagaauacguucugcaaggacgugucccggaauuuuuucgaaagaagggucuucug
((((((((((((((((((((((((((((((.(.(((((.((...................(((((((((.....)))))))))(((...)))..(((((..........)))))...))))))).).))))))))))))))))))))))))))))))

Structure

                              A G     a  ---------------ccgaaaaacuccuagaaga         c 
cggaagacucuucuUUCGGAAAAAUUCUGG A ACGUC cu                                  accuucuuc g
|||||||||||||||||||||||||||||| | ||||| ||                                  ||||||||| g
gucuucugggaagaaagcuuuuuuaaggcc u ugcag ga                                  uggaagaag a
                              c g     -  acgucuugcauaagaccucaagaagcccuccggg         a 

Annotation confidence Not enough data

Genome context

chr20: 1756046-1756202 [+]

Mature gma-miR4400

• Accession: MIMAT0018316
• Description: Glycine max gma-miR4400 mature miRNA
• Sequence: 15 - UUCGGAAAAAUUCUGGAAGACGUC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14