Stem-loop gma-MIR4401a

Accession

MI0016560

Description

Glycine max gma-MIR4401a precursor miRNA

Literature search

1 open access papers mention gma-MIR4401a
(1 sentences)

Sequence

cgucuuugaaugccuacuuucaaagacauuguugagguaagcaccgucuuugaaaguacgcauucuaagauggugcuuaccucaACAACGUCUUUGAAAGUAGGCAUUcuaagacg
((((((.((((((((((((((((((((.((((((((((((((((((((((.(((........))).)))))))))))))))))))))).)))))))))))))))))))).))))))

Structure

      u                    a                      u   agu 
cgucuu gaaugccuacuuucaaagac uuguugagguaagcaccgucuu gaa   a
|||||| |||||||||||||||||||| |||||||||||||||||||||| |||    
gcagaa cUUACGGAUGAAAGUUUCUG AACAacuccauucgugguagaa cuu   c
      u                    C                      u   acg 

Annotation confidence Not enough data

Genome context

chr14: 28771219-28771334 [+]

Mature gma-miR4401a

• Accession: MIMAT0018319
• Description: Glycine max gma-miR4401a mature miRNA
• Sequence: 85 - ACAACGUCUUUGAAAGUAGGCAUU - 108
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153