Stem-loop gma-MIR4405

Accession

MI0016565

Description

Glycine max gma-MIR4405 precursor miRNA

Sequence

cAUUCUAAGACGGUUAUCUGGGACCgucuuagaauguggcgcgguggcaaacuuguaauuaagauacucgaaauuucuuuuuacaacacacauuuuaagacgguugucaauaaccgucuuagaaua
.((((((((((((((((..(.(((((((((((((((((((......))....((((((..((((...........)))).))))))..))))))))))))))))).)..)))))))))))))))).

Structure

c                CU G                 gcgcgguggcaaac      uu    uacu 
 AUUCUAAGACGGUUAU  G GACCgucuuagaaugug              uuguaa  aaga    c
 ||||||||||||||||  | |||||||||||||||||              ||||||  ||||    g
 uaagauucugccaaua  u uuggcagaauuuuacac              aacauu  uucu    a
a                ac g                 ------------ac      -u    uuaa 

Annotation confidence Not enough data

Genome context

chr6: 9334440-9334565 [+]

Mature gma-miR4405

• Accession: MIMAT0018324
• Description: Glycine max gma-miR4405 mature miRNA
• Sequence: 2 - AUUCUAAGACGGUUAUCUGGGACC - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14