Stem-loop gma-MIR4408

Accession

MI0016568

Description

Glycine max gma-MIR4408 precursor miRNA

Sequence

ccaaucggaaucuuucuuccaaccuacauccaauguuguuaaaugaccauuauagcgccaccauuaugcuagaacauuauggcggcaccauaaagguuuuuUAACAACAUUGGAUGAGGGUUGGAagaaauauuucaauug
.((((.(((((.(((((((((((((.(((((((((((((((((.((((.((((.(.(((.((((.(((......))).)))).))).).)))).)))).))))))))))))))))).))))))))))))).))))).))))

Structure

c    c     c             a                 u    a    a c   a    u   cu 
 caau ggaau uuucuuccaaccu cauccaauguuguuaaa gacc uuau g gcc ccau aug  a
 |||| ||||| ||||||||||||| ||||||||||||||||| |||| |||| | ||| |||| |||   
 guua cuuua aaagaAGGUUGGG GUAGGUUACAACAAUuu uugg aaua c cgg ggua uac  g
-    a     u             A                 u    a    c a   c    u   aa 

Annotation confidence Not enough data

Genome context

chr8: 28086876-28087016 [+]

Mature gma-miR4408

• Accession: MIMAT0018327
• Description: Glycine max gma-miR4408 mature miRNA
• Sequence: 102 - UAACAACAUUGGAUGAGGGUUGGA - 125
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153