Dead hairpin entry

Stem-loop ath-MIR3932b

Accession

MI0016588

Description

Arabidopsis thaliana ath-MIR3932b precursor miRNA MIR3932

Gene
family

RF03670; MIR3932

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention ath-MIR3932b
(2 sentences)

Sequence

118588 reads, 290.0 reads per million, 177 experiments

agugUUUGACGUGCUCGAUCUGCUccuuuaugucuucauugucaucacaaauuucuucaaacuuaaauaucuuaaggaccuucaccggacuugauaauagagauuaACGAACUUUGUGAUGACAACGAAgacacagcugaucaaaucaag
................((((.(((......(((((((.(((((((((((((.(((......(((...((((..(((..((......)).)))))))...)))......))).))))))))))))).))))))).))).))))........

Structure

agugUUUGACGUGCUC    U   ccuuua       a             u   uucaaa   aaa    uu   ga  uu 
                GAUC GCU      ugucuuc uugucaucacaaa uuc      cuu   uauc  aag  cc  c
                |||| |||      ||||||| ||||||||||||| |||      |||   ||||  |||  ||   
                cuag cga      acagAAG AACAGUAGUGUUU AAG      gag   auag  uuc  gg  a
--------gaacuaaa    u   -----c       C             C   CAauua   aua    --   -a  cc