Stem-loop ath-MIR3933

Accession

MI0016589

Description

Arabidopsis thaliana ath-MIR3933 precursor miRNA

Sequence

cuuagaAGAAGCAAAAUGACGACUCGGacaacaauaauacaaaacuaauacuuauuguugucggagucgucauuuugcaucuucuaag
(((((((((.(((((((((((((((.(((((((((((..............))))))))))).))))))))))))))).)))))))))

Structure

         A               G           uacaaa 
cuuagaAGA GCAAAAUGACGACUC Gacaacaauaa      a
||||||||| ||||||||||||||| |||||||||||       
gaaucuucu cguuuuacugcugag cuguuguuauu      c
         a               g           cauaau 

Annotation confidence Not enough data

Genome context

chr5: 15758105-15758192 [+]

Mature ath-miR3933

• Accession: MIMAT0018348
• Description: Arabidopsis thaliana ath-miR3933 mature miRNA
• Sequence: 7 - AGAAGCAAAAUGACGACUCGG - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20621980
   siRNAs from miRNA sites mediate DNA methylation of target genes
   "Chellappan P, Xia J, Zhou X, Gao S, Zhang X, Coutino G, Vazquez F, Zhang W, Jin H"
   "Nucleic Acids Res (2010) 38:6883-6894