Stem-loop hsa-mir-3938

Accession

MI0016594

Symbol

HGNC: MIR3938

Description

Homo sapiens hsa-mir-3938 precursor miRNA

Literature search

1 open access papers mention hsa-mir-3938
(3 sentences)

Sequence

382 reads, 17.0 reads per million, 42 experiments

aggaauuuuuaacccgaucacuAGAUUAUCUACAAGGGAauuuuuuuuuaauuuaaaaAAUUCCCUUGUAGAUAACCCGGUggucagguuggauggcuccaug
.(((...(((((((.(((((((.(.(((((((((((((((((((((........))))))))))))))))))))).).))))))).)))))))....)))...

Structure

--a   -auu       c       A A                     uuu 
   gga    uuuaacc gaucacu G UUAUCUACAAGGGAauuuuuu   a
   |||    ||||||| ||||||| | |||||||||||||||||||||    
   ccu    agguugg cuggUGG C AAUAGAUGUUCCCUUAAaaaa   a
gua   cggu       a       C C                     uuu 

Annotation confidence Medium

Genome context

chr3: 55852492-55852594 [-]

Mature hsa-miR-3938-5p

• Accession: MIMAT0050601
• Description: Homo sapiens hsa-miR-3938-5p mature miRNA
• Sequence: 23 - AGAUUAUCUACAAGGGA - 39
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-3938-3p

• Accession: MIMAT0018353
• Description: Homo sapiens hsa-miR-3938-3p mature miRNA
• Sequence: 59 - AAUUCCCUUGUAGAUAACCCGGU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20498841
   Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers
   Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH
   PLoS One (2010) 5:e10563