Stem-loop hsa-mir-3939

Accession

MI0016596

Symbol

HGNC: MIR3939

Description

Homo sapiens hsa-mir-3939 precursor miRNA

Sequence

171 reads, 3 reads per million, 28 experiments

cuggcuuccaaaggccucuguguguuccuguaugugggcgugcacguaccugucacaugugUACGCGCAGACCACAGGAUGUCcacacuggcuuccaaacacaucu
.(((.......(((((..((((...((((((.(.((.((((((((((.........)))))))))).)).)..))))))....))))..)))))))).........

Structure

--------c   cuuccaa     uc    -ugu      -a g  g          acc 
         ugg       aggcc  ugug    uccugu  u ug gcgugcacgu   u
         |||       |||||  ||||    ||||||  | || ||||||||||   g
         acc       uucgg  acac    AGGACA  A AC CGCAUgugua   u
ucuacacaa   -------     uc    CUGU      CC G  G          cac 

Annotation confidence High

Genome context

chr6: 166997807-166997912 [-]

Mature hsa-miR-3939

• Accession: MIMAT0018355
• Description: Homo sapiens hsa-miR-3939 mature miRNA
• Sequence: 62 - UACGCGCAGACCACAGGAUGUC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20498841
   Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers
   Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH
   PLoS One (2010) 5:e10563