Stem-loop hsa-mir-3943

Accession

MI0016600

Symbol

HGNC: MIR3943

Description

Homo sapiens hsa-mir-3943 precursor miRNA

Literature search

1 open access papers mention hsa-mir-3943
(1 sentences)

Sequence

243 reads, 10 reads per million, 23 experiments

cacacagacggcagcugcggccUAGCCCCCAGGCUUCACUUGGCGuggacaacuugcuaaguaaaguggggggugggccacggcuggcuccuaccuggac
.........(.((((((.((((((.(((((..((((.((((((((.(.....).)))))))).))))))))).)))))).)))))).)(((.....))).

Structure

---cacacagac g      c      G     AG    C        u g 
            g cagcug ggccUA CCCCC  GCUU ACUUGGCG g a
            | |||||| |||||| |||||  |||| |||||||| | c
            c gucggc ccgggu ggggg  ugaa ugaaucgu c a
cagguccauccu g      a      g     --    a        u a 

Annotation confidence Not enough data

Genome context

chr7: 43150895-43150994 [+]

Mature hsa-miR-3943

• Accession: MIMAT0018359
• Description: Homo sapiens hsa-miR-3943 mature miRNA
• Sequence: 23 - UAGCCCCCAGGCUUCACUUGGCG - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20498841
   Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers
   Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH
   PLoS One (2010) 5:e10563