Stem-loop hsa-mir-3944

Accession

MI0016601

Symbol

HGNC: MIR3944

Description

Homo sapiens hsa-mir-3944 precursor miRNA

Sequence

224 reads, 3 reads per million, 33 experiments

uccacccagcaggcgcagguccUGUGCAGCAGGCCAACCGAGAagcgccugcgucucccauuUUCGGGCUGGCCUGCUGCUCCGGaccugugccugaucuuaaugcug
.........(((((((((((((.(.(((((((((((.((((((((((....)))......)))))))..))))))))))).).)))))))))))))............

Structure

---uccacccag             U U           -A       ------   c 
            caggcgcaggucc G GCAGCAGGCCA  CCGAGAa      gcg c
            ||||||||||||| | |||||||||||  |||||||      |||  
            guccguguccaGG C CGUCGUCCGGU  GGCUUuu      ugc u
gucguaauucua             C U           CG       acccuc   g 

Annotation confidence High

Genome context

chr10: 133371556-133371663 [-]

Mature hsa-miR-3944-3p

• Accession: MIMAT0018360
• Description: Homo sapiens hsa-miR-3944-3p mature miRNA
• Sequence: 63 - UUCGGGCUGGCCUGCUGCUCCGG - 85
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-3944-5p

• Accession: MIMAT0019231
• Description: Homo sapiens hsa-miR-3944-5p mature miRNA
• Sequence: 23 - UGUGCAGCAGGCCAACCGAGA - 43
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20498841
   Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers
   Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH
   PLoS One (2010) 5:e10563


2. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86