Stem-loop far-MIR171

Accession

MI0016605

Description

Festuca arundinacea far-MIR171 precursor miRNA

Sequence

gagugcgauguuggcaugguucaaucaacaaucgaguggucucugcauagcuuccuugcuagcgugguggcaugcugcuuugcuugaucUGAUUGAGCCGUGCCAAUAUCgcaagcuuccugccuagccc
...((((((((((((((((((((((((...(((((((((.....((((.(((.((.((....)).)).)))))))....))))))))).)))))))))))))))))))))))).(((........)))..

Structure

--------------gag                        aca         ucucu    a   u  u  c 
                 ugcgauguuggcaugguucaauca   aucgagugg     gcau gcu cc ug u
                 ||||||||||||||||||||||||   |||||||||     |||| ||| || ||  
                 acgCUAUAACCGUGCCGAGUUAGU   uaguucguu     cgua cgg gg gc a
cccgauccguccuucga                        --c         -ucgu    -   u  u  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature far-miR171

• Accession: MIMAT0018364
• Description: Festuca arundinacea far-miR171 mature miRNA
• Sequence: 90 - UGAUUGAGCCGUGCCAAUAUC - 110
• Evidence: not_experimental

References

1. PubMed ID: 20213187
   Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application
   "Unver T, Bakar M, Shearman RC, Budak H"
   "Mol Genet Genomics (2010) 283:397-413