Stem-loop far-MIR1134

Accession

MI0016608

Description

Festuca arundinacea far-MIR1134 precursor miRNA

Sequence

acggcaaucccagcuucaacgggccggugccaggcgugccucccggcgaugcccaucggucgccgacgccuccuagcacgccagcuggcucacaaggugucucucccggcggCGACAACAACAACAAGAAGAAGAGaucaggucuggugcuggcuacuaccaucccggucucagucagugugguggcgcucaucucgcugggugccgugcugcucuuccgcaagaaaaacaacggguccg
((((((..((((((.......((((((((...((((((((....))).)))))))))))))((((((((((.(((((......)))))......)))))))......)))((((.(.((.(((....((....((((((.((..(((((........))))).)).))))))..))..))).)).)))))......))))))))))))..(((......)))..................

Structure

--------------------------------      au      uucaacgggccggugccaggcgugccucccggcgaugcccaucggucgccgacgccuccuagcacgccagcuggcucacaaggugucucucccggc    A A  A   ACAA  AGAA      a  uc     cug 
                                acggca  cccagc                                                                                                ggCG C AC ACA    GA    GAGauc gg  uggug   g
                                ||||||  ||||||                                                                                                |||| | || |||    ||    |||||| ||  |||||    
                                ugccgu  gggucg                                                                                                ucgc g ug ugu    cu    cucugg cc  accau   c
gccugggcaacaaaaagaacgccuucucgucg      --      ------------------------------------------------------------------------------------------cucuac    - g  g   --ga  --ga      c  -u     cau 

Annotation confidence Not enough data

Genome context

Unknown

Mature far-miR1134

• Accession: MIMAT0018367
• Description: Festuca arundinacea far-miR1134 mature miRNA
• Sequence: 113 - CGACAACAACAACAAGAAGAAGAG - 136
• Evidence: not_experimental

References

1. PubMed ID: 20213187
   Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application
   "Unver T, Bakar M, Shearman RC, Budak H"
   "Mol Genet Genomics (2010) 283:397-413