Accession
MI0016726
Description
Citrus sinensis
csi-MIR535a precursor miRNA
Literature search
2 open access papers mention csi-MIR535a
(5 sentences)
(5 sentences)
Sequence
auuuuuucuaaugaacauucuuuguugcaagguuuucugauuguauuguuacuuuuuugugcagauauauaauccuugcccaaacucaagacaacuuuguuUGACAAUGAGAGAGAGCACACccgucagcauucgugcaaa
........................(((((.((....(((((.(...((((.((((((((((((((((.......((((........)))).......)))))).).)))))))))))))...).)))))...)).))))).
........................(((((.((....(((((.(...((((.((((((((((((((((.......((((........)))).......)))))).).)))))))))))))...).)))))...)).))))).
Structure
auuuuuucuaaugaacauucuuug a uuuu u uau a - - uauaauc ccc
uugca gg cugau g uguu cuuuuuugu g cagaua cuug a
||||| || ||||| | |||| ||||||||| | |||||| ||||
aacgu cu gacug c ACGA GAGAGAGUA C GUuugu gaac a
-----------------------a g -uac c CAC - A A uucaaca uca
Annotation confidence
Not enough data
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Genome context
chr2: 14822032-14822172 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from csi-MIR535a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature csi-miR535a
| Accession | MIMAT0018484 |
| Description | Citrus sinensis csi-miR535a mature miRNA |
| Sequence | 102 - UGACAAUGAGAGAGAGCACAC - 122 |
| Evidence |
experimental
Illumina [1] |
References
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