Accession
MI0016729
Description
Citrus sinensis
csi-MIR3947 precursor miRNA
Sequence
1772
reads,
84.0
reads per million, 16 experiments
aauuagauucaagguuuuuaaguuuuguuaucacuucuuacuauuaaaaauaacaaaugaugagauaugUUAUGCUACUGUGAAUUAAAUGUAcuuuuuaagacuuaaacucuuaacuucuuauuucaguAGACGACGUCACAUGAUUAGAAUAUucuuuuau
.......................((((((((..................))))))))....((((.(((((.......(((((......(.((((...(((((.((((....))))..)))))....)))).).....))))).......)))))))))....
.......................((((((((..................))))))))....((((.(((((.......(((((......(.((((...(((((.((((....))))..)))))....)))).).....))))).......)))))))))....
Structure
aauuagauucaagguuuuuaaguuuuguuaucacuucuuacuauuaaaaauaacaaaugau u AUGCUAC AUUAAA G -uuu -c a
gaga augUU UGUGA U UAcu uaaga uuaa c
|||| ||||| ||||| | |||| ||||| ||||
uucu UAUAA ACACU A Auga auucu aauu u
---------------------------------------------------------uauu - GAUUAGU -GCAGC G cuuu uc c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3: 21427651-21427813 [+]
Database links
Mature csi-miR3947-5p
| Accession | MIMAT0018487 |
| Description | Citrus sinensis csi-miR3947-5p mature miRNA |
| Sequence | 70 - UUAUGCUACUGUGAAUUAAAUGUA - 93 |
| Evidence |
experimental
Illumina [1] |
Mature csi-miR3947-3p
| Accession | MIMAT0061499 |
| Description | Citrus sinensis csi-miR3947-3p mature miRNA |
| Sequence | 131 - AGACGACGUCACAUGAUUAGAAUAU - 155 |
| Evidence |
experimental
unknown |
References
|
