Stem-loop oar-mir-3955

Accession

MI0016916

Description

Ovis aries oar-mir-3955 precursor miRNA

Literature search

1 open access papers mention oar-mir-3955
(8 sentences)

Sequence

126 reads, 26 reads per million, 11 experiments

augguuugaaaguaugggauacaUUUGAUGGCUGAUCCUCUCACUacuuuauaccuuggguagUGGGAUUUUAGUCCAUCAUAGagcaagcagauuuguuuucacc
...........((((...))))...((((((((((...(((((((((((........)))))))))))..)))).)))))).(((((((......)))))))....

Structure

augguuugaaaguaugggauacaUU      -    UCC           uau 
                         UGAUGG CUGA   UCUCACUacuu   a
                         |||||| ||||   |||||||||||    
                         ACUACC GAUU   AGGGUgauggg   c
ccacuuuuguuuagacgaacgaGAU      U    -UU           uuc 

Annotation confidence Medium

Genome context

chr18: 64499825-64499930 [+]

Mature oar-miR-3955-5p

• Accession: MIMAT0019245
• Description: Ovis aries oar-miR-3955-5p mature miRNA
• Sequence: 24 - UUUGAUGGCUGAUCCUCUCACU - 45
• Evidence: experimental ; Illumina [1]

Mature oar-miR-3955-3p

• Accession: MIMAT0019246
• Description: Ovis aries oar-miR-3955-3p mature miRNA
• Sequence: 64 - UGGGAUUUUAGUCCAUCAUAG - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662