Stem-loop oar-mir-376c

Accession

MI0016933

Description

Ovis aries oar-mir-376c precursor miRNA

Literature search

2 open access papers mention oar-mir-376c
(2 sentences)

Sequence

22994 reads, 4987 reads per million, 13 experiments

auccuucuuugguauuuaaaagGUGGAUAUUCCGUCUAUGUUUauguuauuuaugguuaAACAUAGAGGAAAUUCCACGUuuucaguaucaaaugcugcuuggaa
.......(((((((((.((((.(((((..((((.((((((((((.............))))))))))))))..))))).)))).)))))))))............

Structure

-----auccuuc         u    g     UA    G          uguua 
            uuugguauu aaaa GUGGA  UUCC UCUAUGUUUa     u
            ||||||||| |||| |||||  |||| ||||||||||     u
            aaacuauga uuuU CACCU  AAGG AGAUACAAau     u
aagguucgucgu         c    G     UA    -          uggua 

Annotation confidence High

Genome context

chr18: 64537853-64537957 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from oar-mir-376c

Mature oar-miR-376c-5p

• Accession: MIMAT0019279
• Description: Ovis aries oar-miR-376c-5p mature miRNA
• Sequence: 23 - GUGGAUAUUCCGUCUAUGUUU - 43
• Evidence: experimental ; Illumina [1]

Mature oar-miR-376c-3p

• Accession: MIMAT0019280
• Description: Ovis aries oar-miR-376c-3p mature miRNA
• Sequence: 60 - AACAUAGAGGAAAUUCCACGU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662