Stem-loop oar-mir-323b

Accession

MI0016951

Description

Ovis aries oar-mir-323b precursor miRNA

Literature search

1 open access papers mention oar-mir-323b
(1 sentences)

Sequence

5 reads, 3 reads per million, 2 experiments

ccagcagugcugccucacgguacuuggagggagguuguccguggugaguuugcauugucuaaugaugCCCAAUACACGGUCGAUCUCUuuucgguaucagauugcaccgg
......((((...((...((((((.((((((((((((.(((((........(((((((...)))))))......))))).))))))))))))))))))))...))))...

Structure

ccagca    ugc  cac      u            u     gugaguuu       c 
      gugc   cu   gguacu ggagggagguug ccgug        gcauugu  
      ||||   ||   |||||| |||||||||||| |||||        ||||||| u
      cacg   ga   cuaugg cuuuUCUCUAGC GGCAC        Cguagua  
---ggc    uua  ---      -            U     --AUAACC       a 

Annotation confidence Not enough data

Genome context

chr18: 64553587-64553696 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from oar-mir-323b

Mature oar-miR-323b

• Accession: MIMAT0019314
• Description: Ovis aries oar-miR-323b mature miRNA
• Sequence: 68 - CCCAAUACACGGUCGAUCUCU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662