Stem-loop oar-mir-369

Accession

MI0016960

Description

Ovis aries oar-mir-369 precursor miRNA

Literature search

1 open access papers mention oar-mir-369
(1 sentences)

Sequence

2531 reads, 575 reads per million, 13 experiments

agcaucucuccugguaccugaagggAGAUCGACCGUGUUAUAUUCGcuuuauugacuucgAAUAAUACAUGGUUGAUCUUUucucaguaucaaaucucaccuuggag
.......((((((((((.(((.((((((((((((((((..((((((............))))))..)))))))))))))))).)))))))))...........))))

Structure

agcaucu    -----------      c   a                UA      cuuua 
       cucc           ugguac uga gggAGAUCGACCGUGU  UAUUCG     u
       ||||           |||||| ||| ||||||||||||||||  ||||||      
       gagg           acuaug acu uUUUCUAGUUGGUACA  AUAAgc     u
-------    uuccacucuaa      -   c                UA      uucag 

Annotation confidence High

Genome context

chr18: 64562459-64562565 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from oar-mir-369

Mature oar-miR-369-5p

• Accession: MIMAT0019331
• Description: Ovis aries oar-miR-369-5p mature miRNA
• Sequence: 26 - AGAUCGACCGUGUUAUAUUCG - 46
• Evidence: experimental ; Illumina [1]

Mature oar-miR-369-3p

• Accession: MIMAT0019332
• Description: Ovis aries oar-miR-369-3p mature miRNA
• Sequence: 61 - AAUAAUACAUGGUUGAUCUUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662