miRBase entry: mmu-mir-101c

Stem-loop mmu-mir-101c


Accession
MI0016974
Symbol
MGI: Mir101c
Description
Mus musculus mmu-mir-101c precursor miRNA

Literature search
108 open access papers mention mmu-mir-101c
(826 sentences)

Sequence

3116 reads, 56 reads per million, 93 experiments
ugaugcccuacugcacaguccugugaugacugacugcucaacugcACAGUACUGUGAUAACUGAucgccuaacug
.(((.........((((((.(((((.....(((....)))....))))).)))))).......))).........

Structure
--------u   gcccuacug      c     augac   c 
         gau         cacagu cugug     uga u
         |||         |||||| |||||     |||  
         cuA         GUGUCA GACAc     acu g
gucaauccg   --GUCAAUA      U     -guca   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr9: 3038669-3038743 [-]

Database links

Mature mmu-miR-101c

Accession MIMAT0019349
Description Mus musculus mmu-miR-101c mature miRNA
Sequence 46 - ACAGUACUGUGAUAACUGA - 64
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20935160
    Next-generation sequencing identifies the natural killer cell microRNA transcriptome
    "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
    "Genome Res (2010) 20:1590-1604