miRBase entry: mmu-mir-3966

Stem-loop mmu-mir-3966


Accession
MI0016975
Symbol
MGI: Mir3966
Description
Mus musculus mmu-mir-3966 precursor miRNA


Sequence

2 reads, 2 reads per million, 2 experiments
aacacaggaaaagacAGCUGCCAGCUGUAGAACUGUuuuuaauuaaaacuguguucaucaugcuugcugcagaguuuucuuauuu
.....(((((((..(.((.((.(((((..((((.(((((.....)))))...))))..)).))).)).)).)..)))))))....

Structure
aacac       ga A  U  C   -  UA    --U     u 
     aggaaaa  c GC GC AGC UG  GAAC   GUuuu a
     |||||||  | || || ||| ||  ||||   ||||| a
     uucuuuu  g cg cg ucg ac  cuug   caaaa u
-uuua       ga a  u  u   u  ua    ugu     u 


Annotation confidence Not enough data
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Genome context
chr10: 97423478-97423562 [+]

Database links

Mature mmu-miR-3966

Accession MIMAT0019350
Description Mus musculus mmu-miR-3966 mature miRNA
Sequence 16 - AGCUGCCAGCUGUAGAACUGU - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20935160
    Next-generation sequencing identifies the natural killer cell microRNA transcriptome
    "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
    "Genome Res (2010) 20:1590-1604