Stem-loop mmu-mir-3968

Accession

MI0016977

Symbol

MGI: Mir3968

Description

Mus musculus mmu-mir-3968 precursor miRNA

Literature search

3 open access papers mention mmu-mir-3968
(6 sentences)

Sequence

45 reads, 49437 reads per million, 16 experiments

acgccgagcguguggugguaggauccguguagcaccgucuguguguuguugugccacacagagaacuugagCGAAUCCCACUCCAGACACCAugaguagg
...((..((.(((((((((.((((.(((.........((((((((.........))))))))........))).)))).))......))))))).)).))

Structure

acg  ga  g       ------  a    c   guagcaccg        uug 
   cc  gc uguggug      gu ggau cgu         ucugugug   u
   ||  || |||||||      || |||| |||         ||||||||   u
   gg  ug guACCAC      CA CCUA GCg         agacacac   g
---  -a  a       AGACCU  C    A   -aguucaag        cgu 

Annotation confidence Not enough data

Genome context

chr11: 115447961-115448060 [-]

Mature mmu-miR-3968

• Accession: MIMAT0019352
• Description: Mus musculus mmu-miR-3968 mature miRNA
• Sequence: 72 - CGAAUCCCACUCCAGACACCA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20935160
   Next-generation sequencing identifies the natural killer cell microRNA transcriptome
   "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
   "Genome Res (2010) 20:1590-1604