Stem-loop mmu-mir-3969

Accession

MI0016978

Symbol

MGI: Mir3969

Description

Mus musculus mmu-mir-3969 precursor miRNA

Literature search

1 open access papers mention mmu-mir-3969
(1 sentences)

Sequence

23 reads, 1 reads per million, 13 experiments

aaauggauuucCCCUAAAGUAGAAAUCACUAuagaguugcaugguuacagaggacuagaauuuagauuagcuacuuacagggcuucagaucu
....((((((.((((.((((((.((((.......((((...((....))...))))........))))..))))))..))))....))))))

Structure

aaau      ---c    -A      -A    -ACUAuag    gca  g 
    ggauuu    CCCU  AAGUAG  AAUC        aguu   ug u
    ||||||    ||||  ||||||  ||||        ||||   ||  
    ucuaga    ggga  uucauc  uuag        ucag   ac u
----      cuuc    ca      ga    auuuaaga    gag  a 

Annotation confidence Not enough data

Genome context

chr5: 87595902-87595993 [-]

Mature mmu-miR-3969

• Accession: MIMAT0019353
• Description: Mus musculus mmu-miR-3969 mature miRNA
• Sequence: 12 - CCCUAAAGUAGAAAUCACUA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20935160
   Next-generation sequencing identifies the natural killer cell microRNA transcriptome
   "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
   "Genome Res (2010) 20:1590-1604