Stem-loop pma-mir-1b

Accession

MI0017000

Description

Petromyzon marinus pma-mir-1b precursor miRNA

Sequence

ucccagccagagcacguacuucuuuauaaagccacgugcgcgagcugggaucgUGGAAUGUAAAGAAGUAUGGGUucuggguggga
(((((.(((((((.((((((((((((((...(((((..(.(.....).)..)))))..)))))))))))))).))))))).)))))

Structure

     g       a              aag     ug g g 
uccca ccagagc cguacuucuuuaua   ccacg  c c a
||||| ||||||| ||||||||||||||   |||||  | | g
agggu ggucuUG GUAUGAAGAAAUGU   GGUgc  g g c
     g       G              -AA     ua g u 

Annotation confidence Not enough data

Genome context

ref|NC_046080.1|: 13837263-13837348 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pma-mir-1b

Mature pma-miR-1b-3p

• Accession: MIMAT0019366
• Description: Petromyzon marinus pma-miR-1b-3p mature miRNA
• Sequence: 54 - UGGAAUGUAAAGAAGUAUGGGU - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383