Stem-loop pma-mir-9a-2

Accession

MI0017007

Description

Petromyzon marinus pma-mir-9a-2 precursor miRNA

Sequence

uucuaguaggugguaUCUUUGGUUAUCUAGCUGUAUGagugugucuggccgucaUAAAGCUAGAUAACCGAAAGUAccaacgacuucca
....(((...((((((.(((((((((((((((.(((((..((.....))..))))).))))))))))))))).))))))...)))....

Structure

uucu   agg      C               G     gu  g 
    agu   ugguaU UUUGGUUAUCUAGCU UAUGa  gu u
    |||   |||||| ||||||||||||||| |||||  || c
    uca   accAUG AAGCCAAUAGAUCGA AUacu  cg u
accu   gca      A               A     gc  g 

Annotation confidence Not enough data

Genome context

GL492128.1: 47-135 [+]

Mature pma-miR-9a-5p

• Accession: MIMAT0019373
• Description: Petromyzon marinus pma-miR-9a-5p mature miRNA
• Sequence: 16 - UCUUUGGUUAUCUAGCUGUAUG - 37
• Evidence: experimental ; 454 [1]

Mature pma-miR-9a-3p

• Accession: MIMAT0019374
• Description: Petromyzon marinus pma-miR-9a-3p mature miRNA
• Sequence: 55 - UAAAGCUAGAUAACCGAAAGUA - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383