Stem-loop pma-mir-27a

Accession

MI0017033

Description

Petromyzon marinus pma-mir-27a precursor miRNA

Sequence

gcagugcaggacuuaguugcuugugagcagugccuugcuuucugucuugUUCACAGUGGCUAAGUUCCACaccuc
...(((..(((((((((((((.((((((((.((..........)).)))))))))))))))))))))..)))...

Structure

gca   ca             u        u  cuug 
   gug  ggacuuaguugcu gugagcag gc    c
   |||  ||||||||||||| |||||||| ||     
   caC  CUUGAAUCGGUGA CACUUguu ug    u
cuc   AC             -        c  ucuu 

Annotation confidence Not enough data

Genome context

GL477342.1: 30392-30466 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pma-mir-27a

Mature pma-miR-27a

• Accession: MIMAT0019413
• Description: Petromyzon marinus pma-miR-27a mature miRNA
• Sequence: 50 - UUCACAGUGGCUAAGUUCCAC - 70
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383