Stem-loop pma-mir-29b

Accession

MI0017036

Description

Petromyzon marinus pma-mir-29b precursor miRNA

Sequence

cgacucgcgugaccgauuucccuugguguuuagauguggauguggucucUAGCACCAUUAGAAAUCGGUUAugcgggcg
((.(((((((((((((((((...(((((((.((((.........))))..)))))))...)))))))))))))))))))

Structure

  a                 ccu       -u    gug 
cg cucgcgugaccgauuuc   ugguguu  agau   g
|| |||||||||||||||||   |||||||  ||||   a
gc gggcguAUUGGCUAAAG   ACCACGA  ucug   u
  -                 AUU       Uc    gug 

Annotation confidence Not enough data

Genome context

ref|NC_046082.1|: 14311942-14312020 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-29b

Mature pma-miR-29b-3p

• Accession: MIMAT0019418
• Description: Petromyzon marinus pma-miR-29b-3p mature miRNA
• Sequence: 50 - UAGCACCAUUAGAAAUCGGUUA - 71
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383