Stem-loop pma-mir-96a

Accession

MI0017051

Description

Petromyzon marinus pma-mir-96a precursor miRNA

Sequence

ucuuacccgcUUUGGCACUGGCACAUACUUGCUucacugugaaacccugagcaauuauguguagugccgacucggguagaa
..(((((((..(((((((((.((((((.(((((.((..((...))..))))))).)))))))))))))))..)))))))..

Structure

uc       cU         G      C     u  cu  g 
  uuacccg  UUGGCACUG CACAUA UUGCU ca  gu  
  |||||||  ||||||||| |||||| ||||| ||  || a
  gaugggc  agccgugau guguau aacga gu  ca  
aa       uc         -      u     -  cc  a 

Annotation confidence Not enough data

Genome context

ref|NC_046104.1|: 2252292-2252372 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pma-mir-96a

Mature pma-miR-96a-5p

• Accession: MIMAT0019436
• Description: Petromyzon marinus pma-miR-96a-5p mature miRNA
• Sequence: 11 - UUUGGCACUGGCACAUACUUGCU - 33
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383