Stem-loop pma-mir-124-1

Accession

MI0017057

Description

Petromyzon marinus pma-mir-124-1 precursor miRNA

Literature search

1 open access papers mention pma-mir-124-1
(2 sentences)

Sequence

cguccgcucuuCGUGUUCACAGCGGACCUUGAUuuaaugugcuacaauUAAGGCACGCGGUGAAUGCCAagagcggugu
...((((((((.((((((((.(((..((((((((...........))))))))..))).)))))))).))))))))...

Structure

cgu        C        A   GA        uaau 
   ccgcucuu GUGUUCAC GCG  CCUUGAUu    g
   |||||||| |||||||| |||  ||||||||    u
   ggcgagaA CGUAAGUG CGC  GGAAUuaa    g
ugu        C        G   AC        cauc 

Annotation confidence Not enough data

Genome context

ref|NC_046071.1|: 1967896-1967974 [+]

Mature pma-miR-124-1-5p

• Accession: MIMAT0019444
• Description: Petromyzon marinus pma-miR-124-1-5p mature miRNA
• Sequence: 12 - CGUGUUCACAGCGGACCUUGAU - 33
• Evidence: experimental ; 454 [1]

Mature pma-miR-124-1-3p

• Accession: MIMAT0019445
• Description: Petromyzon marinus pma-miR-124-1-3p mature miRNA
• Sequence: 49 - UAAGGCACGCGGUGAAUGCCA - 69
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383