Stem-loop pma-mir-138b

Accession

MI0017076

Description

Petromyzon marinus pma-mir-138b precursor miRNA

Sequence

uggugccgugccgcAGCUGGUGUUGUGAAUCAGGCUGauccucuccugcuccuccgccgcuucacagcaccggcacggcacggcc
....(((((((((..((((((((((((((...(((.((....(....)....)).)))..)))))))))))))).))))))))).

Structure

uggu         cA              UCA   U  uccu u 
    gccgugccg  GCUGGUGUUGUGAA   GGC Ga    c c
    |||||||||  ||||||||||||||   ||| ||    |  
    cggcacggc  cggccacgacacuu   ccg cu    g c
---c         -a              -cg   c  ccuc u 

Annotation confidence Not enough data

Genome context

GL477603.1: 148354-148438 [+]

Mature pma-miR-138b

• Accession: MIMAT0019470
• Description: Petromyzon marinus pma-miR-138b mature miRNA
• Sequence: 15 - AGCUGGUGUUGUGAAUCAGGCUG - 37
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383