Stem-loop pma-mir-145

Accession

MI0017080

Description

Petromyzon marinus pma-mir-145 precursor miRNA

Sequence

ugcgugggcaugGUCCAGUUUUCCCAGGAAUCCCUgugcccuuuucccggGAUUCCAGGAAUAACUGUCCAagcacacgug
.(((((.((.(((..(((((((((..((((((((..............)))))))).)))).))))).))).)).))))).

Structure

u     g  a   UC     -    CA        Ugugcc 
 gcgug gc ugG  CAGUU UUCC  GGAAUCCC      c
 ||||| || |||  ||||| ||||  ||||||||       
 ugcac cg ACC  GUCAA AAGG  CCUUAGgg      u
g     a  a   -U     U    -A        cccuuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-145-5p

• Accession: MIMAT0019476
• Description: Petromyzon marinus pma-miR-145-5p mature miRNA
• Sequence: 13 - GUCCAGUUUUCCCAGGAAUCCCU - 35
• Evidence: experimental ; 454 [1]

Mature pma-miR-145-3p

• Accession: MIMAT0019477
• Description: Petromyzon marinus pma-miR-145-3p mature miRNA
• Sequence: 51 - GAUUCCAGGAAUAACUGUCCA - 71
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383