Stem-loop pma-mir-146

Accession

MI0017081

Description

Petromyzon marinus pma-mir-146 precursor miRNA

Sequence

ccgggcggUGAGAACUGAAUUCCAUAGGCUgugacgacacugcagcAGCCUGGGUCUUCAGUUUUCUCCgucagg
((.(((((.((((((((((..((.((((((((..((....))..))))))))))..)))))))))).))))).))

Structure

  g     U          UU  A        ga  a 
cc ggcgg GAGAACUGAA  CC UAGGCUgu  cg c
|| ||||| ||||||||||  || ||||||||  ||  
gg cugCC CUUUUGACUU  GG GUCCGAcg  gu a
  a     U          CU  -        ac  c 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-146-5p

• Accession: MIMAT0019478
• Description: Petromyzon marinus pma-miR-146-5p mature miRNA
• Sequence: 9 - UGAGAACUGAAUUCCAUAGGCU - 30
• Evidence: experimental ; 454 [1]

Mature pma-miR-146-3p

• Accession: MIMAT0019479
• Description: Petromyzon marinus pma-miR-146-3p mature miRNA
• Sequence: 47 - AGCCUGGGUCUUCAGUUUUCUCC - 69
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383